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A Chromosome-Level Genome Assembly of Dendrobium Huoshanense Using Long Reads and Hi-C Data Journal article
Genome biology and evolution, 2020,Volume: 12,Issue: 12,Page: 2486-2490
Authors:  Han,Bangxing;  Jing,Yi;  Dai,Jun;  Zheng,Tao;  Gu,Fangli;  Zhao,Qun;  Zhu,Fucheng;  Song,Xiangwen;  Deng,Hui;  Wei,Peipei;  Song,Cheng;  Liu,Dong;  Jiang,Xueping;  Wang,Fang;  Chen,Yanjun;  Sun,Chuanbo;  Yao,Houjun;  Zhang,Li;  Chen,Naidong;  Chen,Shaotong;  Li,Xiaoli;  Wei,Yuan;  Ouyang,Zhen;  Yan,Hui;  Lu,Jiangjie;  Wang,Huizhong;  Guo,Lanping;  Kong,Lingdong;  Zhao,Jing;  Li,Shaoping;  Luo,Lifen;  Kristiansen,Karsten;  Feng,Zhan;  Sun,Silong;  Chen,Cunwu;  Yue,Zhen;  Chen,Naifu
Favorite |  | TC[WOS]:2 TC[Scopus]:2 | Submit date：2021/03/01
Annotation  De Novo Assembly  Genome  Hi-c Assembly  Orchid  
Transcriptome analysis of peripheral whole blood identifies crucial lncRNAs implicated in childhood asthma Journal article
BMC Medical Genomics, 2020,Volume: 13,Issue: 1
Authors:  Zheng P.;  Huang C.;  Leng D.;  Sun B.;  Zhang X.D.
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Childhood Asthma  Deep Rna-sequencing  Long Non-coding Rnas  Transcriptome  
Genome and population sequencing of a chromosome-level genome assembly of the Chinese tapertail anchovy (Coilia nasus) provides novel insights into migratory adaptation Journal article
GigaScience, 2020,Volume: 9,Issue: 1
Authors:  Xu,Gangchun;  Bian,Chao;  Nie,Zhijuan;  Li,Jia;  Wang,Yuyu;  Xu,Dongpo;  You,Xinxin;  Liu,Hongbo;  Gao,Jiancao;  Li,Hongxia;  Liu,Kai;  Yang,Jian;  Li,Quanjie;  Shao,Nailin;  Zhuang,Yanbing;  Fang,Dian;  Jiang,Tao;  Lv,Yunyun;  Huang,Yu;  Gu,Ruobo;  Xu,Junmin;  Ge,Wei;  Shi,Qiong;  Xu,Pao
Favorite |  | TC[WOS]:5 TC[Scopus]:7 | Submit date：2021/03/02
Chinese Tapertail Anchovy (Coilia Nasus)  Genome And Population Sequencing  Genome Assembly  Migratory Dimorphism And Adaptation  
Combinatorial mutagenesis en masse optimizes the genome editing activities of SpCas9 Journal article
NATURE METHODS, 2019,Volume: 16,Issue: 8,Page: 722–730
Authors:  Gigi C. G. Choi;  Peng Zhou;  Chaya T. L. Yuen;  Becky K. C. Chan;  Feng Xu;  Siyu Bao;  Hoi Yee Chu;  Dawn Thean;  Kaeling Tan;  Koon Ho Wong;  Zongli Zheng;  Alan S. L. Wong
Favorite |  | TC[WOS]:18 TC[Scopus]:20 | Submit date：2020/05/21
The first chromosome‐level genome for a marine mammal as a resource to study ecology and evolution Journal article
MOLECULAR ECOLOGY RESOURCES, 2019,Volume: 19,Issue: 4,Page: 944-956
Authors:  Guangyi Fan;  Yaolei Zhang;  Xiaochuan Liu;  Jiahao Wang;  Zeguo Sun;  Shuai Sun;  He Zhang;  Jianwei Chen;  Meiqi Lv;  Kai Han;  Xiaoxuan Tan;  Jie Hu;  Rui Guan;  Yuanyuan Fu;  Shanshan Liu;  Xi Chen;  Qiwu Xu;  Yating Qin;  Longqi Liu;  Jie Bai;  Ou Wang;  Jingbo Tang;  Haorong Lu;  Zhouchun Shang;  Bo Wang;  Guohai Hu;  Xia Zhao;  Yan Zou;  Ao Chen;  Meihua Gong;  Wenwei Zhang;  Simon M.‐Y. Lee;  Songhai Li;  Junnian Liu;  Zhen Li;  Yishan Lu;  Jamal S. M. Sabir;  Mumdooh J. Sabir;  Muhummadh Khan;  Nahid H. Hajrah;  Ye Yin;  Karsten Kristiansen;  Huanming Yang;  Jian Wang;  Xun Xu;  Xin Liu
Favorite |  | TC[WOS]:10 TC[Scopus]:10 | Submit date：2020/01/16
Ancestral Chromosomes  Aquatic Adaptations  Genome Assembly  Genomics/proteomics  Major Histocompatibility Complex  Mammals  Molecular Evolution  Sperm Whale  
A chromosome‐level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth Journal article
MOLECULAR ECOLOGY RESOURCES, 2019,Volume: 19,Issue: 5
Authors:  Yan He;  Yue Chang;  Lisui Bao;  Mengjun Yu;  Rui Li;  Jingjing Niu;  Guangyi Fan;  Weihao Song;  Inge Seim;  Yating Qin;  Xuemei Li;  Jinxiang Liu;  Xiangfu Kong;  Meiting Peng;  Minmin Sun;  Mengya Wang;  Jiangbo Qu;  Xuangang Wang;  Xiaobing Liu;  Xiaolong Wu;  Xi Zhao;  Xuliang Wang;  Yaolei Zhang;  Jiao Guo;  Yang Liu;  Kaiqiang Liu;  Yilin Wang;  He Zhang;  Longqi Liu;  Mingyue Wang;  Haiyang Yu;  Xubo Wang;  Jie Cheng;  Zhigang Wang;  Xun Xu;  Jian Wang;  Huanming Yang;  Simon Ming‐Yuen Lee;  Xin Liu;  Quanqi Zhang;  Jie Qi
Favorite |  | TC[WOS]:18 TC[Scopus]:20 | Submit date：2020/01/16
Astacin Metalloproteinase  Atac‐seq  Evolution  Rockfish Genome  Viviparity  Zona Pellucida  
New insights from Opisthorchis felineus genome: update on genomics of the epidemiologically important liver flukes Journal article
BMC GENOMICS, 2019
Authors:  Nikita I. Ershov;  Viatcheslav A. Mordvinov;  Egor B. Prokhortchouk;  Mariya Y. Pakharukova;  Konstantin V. Gunbin;  Kirill Ustyantsev;  Mikhail A. Genaev;  Alexander G. Blinov;  Alexander Mazur;  Eugenia Boulygina;  Svetlana Tsygankova;  Ekaterina Khrameeva;  Nikolay Chekanov;  Guangyi Fan;  An Xiao;  He Zhang;  Xun Xu;  Huanming Yang;  Victor Solovyev;  Simon Ming-Yuen Lee;  Xin Liu;  Dmitry A. Afonnikov;  Konstantin G. Skryabin
Favorite |  | TC[WOS]:14 TC[Scopus]:14 | Submit date：2020/01/16
Opisthorchiidae  Opisthorchis Felineus  Genome  Trans-splicing  Microintrons  Liver Flukes  Transcriptome  Metacercariae  
Re-analysis of the coral Acropora digitifera transcriptome reveals a complex lncRNAs-mRNAs interaction network implicated in Symbiodinium infection Journal article
BMC Genomics, 2019,Volume: 20,Issue: 1
Authors:  Huang C.;  Leng D.;  Sun S.;  Zhang X.D.
Adobe PDF | Favorite |  | TC[WOS]:4 TC[Scopus]:3 | Submit date：2021/03/03
Acropora Digitifera  Alternative Splicing  Deep Rna-sequencing  Long Non-coding Rnas  Symbiodinium  Transcriptome  
Co-expression network analysis of lncrnas and mrnas in rat liver tissue reveals the complex interactions in response to pathogenic cytotoxicity Journal article
International Journal of Biological Sciences, 2019,Volume: 15,Issue: 11,Page: 2296-2307
Authors:  Leng D.;  Huang C.;  Lei K.C.;  Sun S.;  Sun B.;  Zhang X.D.
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Cytotoxicity  Interaction Network  Liver Disease  Lncrnas  
Chromosome-level reference genome of the Siamese fighting fish Betta splendens, a model species for the study of aggression Journal article
GIGASCIENCE, 2018,Volume: 7,Issue: 11
Authors:  Guangyi Fan;  Judy Chan;  Kailong Ma;  Binrui Yang;  He Zhang;  Xianwei Yang;  Chengcheng Shi;  Henry Chun-Hin Law;  Zhitao Ren;  Qiwu Xu;  Qun Liu;  Jiahao Wang;  Wenbin Chen;  Libin Shao;  David Goncalves;  Andreia Ramos;  Sara D. Cardoso;  Min Guo;  Jing Cai;  Xun Xu;  Jian Wang;  Huanming Yang;  Xin Liu;  Yitao Wang
Favorite |  | TC[WOS]:8 TC[Scopus]:9 | Submit date：2020/07/14
Betta Splendens  Aggression  Hi-c  Chromosomal Genome Assembly  Resequencing  Fish Genome