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Comparative genomics provides insights into the aquatic adaptations of mammals Journal article
Proceedings of the National Academy of Sciences of the United States of America, 2021,Volume: 118,Issue: 37
Authors:  Yuan, Yuan;  Zhang, Yaolei;  Zhang, Peijun;  Liu, Chang;  Wang, Jiahao;  Gao, Haiyu;  Rus Hoelzel, A.;  Seim, Inge;  Lv, Meiqi;  Lin, Mingli;  Dong, Lijun;  Gao, Haoyang;  Yang, Zixin;  Caruso, Francesco;  Lin, Wenzhi;  Da Fonseca, Rute R.;  Wang, Ding;  Wang, Xianyan;  Rasmussen, Marianne H.;  Liu, Mingming;  Zheng, Jinsong;  Zhao, Liyuan;  Campos, Paula F.;  Kang, Hui;  Iversen, Maria;  Song, Yue;  Guo, Xinyu;  Guo, Jiao;  Qin, Yating;  Pan, Shanshan;  Xu, Qiwu;  Meng, Lingfeng;  Yunga, A.;  Liu, Shanshan;  Ming-Yuen Lee, Simon;  Liu, Xin;  Xu, Xun;  Yang, Huanming;  Fan, Guangyi;  Wang, Kun;  Li, Songhai
Favorite |  | TC[WOS]:6 TC[Scopus]:7 | Submit date:2021/12/08
Aquatic Adaptation  Comparative Genomics  Marine Mammals  
An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species Journal article
iScience, 2020,Volume: 23,Issue: 10
Authors:  Zhang,Peijun;  Zhao,Yong;  Li,Chang;  Lin,Mingli;  Dong,Lijun;  Zhang,Rui;  Liu,Mingzhong;  Li,Kuan;  Zhang,He;  Liu,Xiaochuan;  Zhang,Yaolei;  Yuan,Yuan;  Liu,Huan;  Seim,Inge;  Sun,Shuai;  Du,Xiao;  Chang,Yue;  Li,Feida;  Liu,Shanshan;  Lee,Simon Ming Yuen;  Wang,Kun;  Wang,Ding;  Wang,Xianyan;  McGowen,Michael R.;  Jefferson,Thomas A.;  Olsen,Morten Tange;  Stiller,Josefin;  Zhang,Guojie;  Xu,Xun;  Yang,Huanming;  Fan,Guangyi;  Liu,Xin;  Li,Songhai
Favorite |  | TC[WOS]:9 TC[Scopus]:13 | Submit date:2021/03/01
Evolutionary Biology  Genetics  Genomics  
The Chromosome Level Genome and Genome-wide Association Study for the Agronomic Traits of Panax Notoginseng Journal article
iScience, 2020,Volume: 23,Issue: 9
Authors:  Fan, Guangyi;  Liu, Xiaochuan;  Sun, Shuai;  Shi, Chengcheng;  Du, Xiao;  Han, Kai;  Yang, Binrui;  Fu, Yuanyuan;  Liu, Minghua;  Seim, Inge;  Zhang, He;  Xu, Qiwu;  Wang, Jiahao;  Su, Xiaoshan;  Shao, Libin;  Zhu, Yuanfang;  Shao, Yunchang;  Zhao, Yunpeng;  Wong, Andrew KC;  Zhuang, Dennis;  Chen, Wenbin;  Zhang, Gengyun;  Yang, Huanming;  Xu, Xun;  Tsui, Stephen Kwok Wing;  Liu, Xin;  Lee, Simon Ming Yue
Favorite |  | TC[WOS]:13 TC[Scopus]:14 | Submit date:2021/12/06
Biological Sciences  Genomics  Plant Biology  Transcriptomics  
Complete Chloroplast Genomes of 14 Mangroves: Phylogenetic and Comparative Genomic Analyses Journal article
BioMed Research International, 2020,Volume: 2020
Authors:  Shi,Chengcheng;  Han,Kai;  Li,Liangwei;  Seim,Inge;  Lee,Simon Ming Yuen;  Xu,Xun;  Yang,Huanming;  Fan,Guangyi;  Liu,Xin
Favorite |  | TC[WOS]:7 TC[Scopus]:8 | Submit date:2021/03/01
Resequencing 545 ginkgo genomes across the world reveals the evolutionary history of the living fossil Journal article
NATURE COMMUNICATIONS, 2019,Volume: 10
Authors:  Yun-Peng Zhao;  Guangyi Fan;  Ping-Ping Yin;  Shuai Sun;  Ning Li;  Xiaoning Hong;  Gang Hu;  He Zhang;  Fu-Min Zhang;  Jing-Dan Han;  Ya-Jun Hao;  Qiwu Xu;  Xianwei Yang;  Wenjie Xia;  Wenbin Chen;  Han-Yang Lin;  Rui Zhang;  Jiang Chen;  Xiao-Ming Zheng;  Simon Ming-Yuen Lee;  Joongku Lee;  Koichi Uehara;  Jian Wang;  Huanming Yang;  Cheng-Xin Fu;  Xin Liu;  Xun Xu;  Song Ge
Favorite |  | TC[WOS]:35 TC[Scopus]:43 | Submit date:2020/01/16
The first chromosome‐level genome for a marine mammal as a resource to study ecology and evolution Journal article
MOLECULAR ECOLOGY RESOURCES, 2019,Volume: 19,Issue: 4,Page: 944-956
Authors:  Guangyi Fan;  Yaolei Zhang;  Xiaochuan Liu;  Jiahao Wang;  Zeguo Sun;  Shuai Sun;  He Zhang;  Jianwei Chen;  Meiqi Lv;  Kai Han;  Xiaoxuan Tan;  Jie Hu;  Rui Guan;  Yuanyuan Fu;  Shanshan Liu;  Xi Chen;  Qiwu Xu;  Yating Qin;  Longqi Liu;  Jie Bai;  Ou Wang;  Jingbo Tang;  Haorong Lu;  Zhouchun Shang;  Bo Wang;  Guohai Hu;  Xia Zhao;  Yan Zou;  Ao Chen;  Meihua Gong;  Wenwei Zhang;  Simon M.‐Y. Lee;  Songhai Li;  Junnian Liu;  Zhen Li;  Yishan Lu;  Jamal S. M. Sabir;  Mumdooh J. Sabir;  Muhummadh Khan;  Nahid H. Hajrah;  Ye Yin;  Karsten Kristiansen;  Huanming Yang;  Jian Wang;  Xun Xu;  Xin Liu
Favorite |  | TC[WOS]:13 TC[Scopus]:13 | Submit date:2020/01/16
Ancestral Chromosomes  Aquatic Adaptations  Genome Assembly  Genomics/proteomics  Major Histocompatibility Complex  Mammals  Molecular Evolution  Sperm Whale  
A chromosome‐level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth Journal article
MOLECULAR ECOLOGY RESOURCES, 2019,Volume: 19,Issue: 5
Authors:  Yan He;  Yue Chang;  Lisui Bao;  Mengjun Yu;  Rui Li;  Jingjing Niu;  Guangyi Fan;  Weihao Song;  Inge Seim;  Yating Qin;  Xuemei Li;  Jinxiang Liu;  Xiangfu Kong;  Meiting Peng;  Minmin Sun;  Mengya Wang;  Jiangbo Qu;  Xuangang Wang;  Xiaobing Liu;  Xiaolong Wu;  Xi Zhao;  Xuliang Wang;  Yaolei Zhang;  Jiao Guo;  Yang Liu;  Kaiqiang Liu;  Yilin Wang;  He Zhang;  Longqi Liu;  Mingyue Wang;  Haiyang Yu;  Xubo Wang;  Jie Cheng;  Zhigang Wang;  Xun Xu;  Jian Wang;  Huanming Yang;  Simon Ming‐Yuen Lee;  Xin Liu;  Quanqi Zhang;  Jie Qi
Favorite |  | TC[WOS]:24 TC[Scopus]:27 | Submit date:2020/01/16
Astacin Metalloproteinase  Atac‐seq  Evolution  Rockfish Genome  Viviparity  Zona Pellucida  
New insights from Opisthorchis felineus genome: update on genomics of the epidemiologically important liver flukes Journal article
BMC GENOMICS, 2019
Authors:  Nikita I. Ershov;  Viatcheslav A. Mordvinov;  Egor B. Prokhortchouk;  Mariya Y. Pakharukova;  Konstantin V. Gunbin;  Kirill Ustyantsev;  Mikhail A. Genaev;  Alexander G. Blinov;  Alexander Mazur;  Eugenia Boulygina;  Svetlana Tsygankova;  Ekaterina Khrameeva;  Nikolay Chekanov;  Guangyi Fan;  An Xiao;  He Zhang;  Xun Xu;  Huanming Yang;  Victor Solovyev;  Simon Ming-Yuen Lee;  Xin Liu;  Dmitry A. Afonnikov;  Konstantin G. Skryabin
Favorite |  | TC[WOS]:17 TC[Scopus]:17 | Submit date:2020/01/16
Opisthorchiidae  Opisthorchis Felineus  Genome  Trans-splicing  Microintrons  Liver Flukes  Transcriptome  Metacercariae  
A survey of the sperm whale (Physeter catodon) commensal microbiome Journal article
PeerJ, 2019,Volume: 2019,Issue: 7
Authors:  Li, Chang;  Tan, Xiaoxuan;  Bai, Jie;  Xu, Qiwu;  Liu, Shanshan;  Guo, Wenjie;  Yu, Cong;  Fan, Guangyi;  Lu, Yishan;  Zhang, He;  Yang, Huanming;  Chen, Jianwei;  Liu, Xin
Favorite |  | TC[WOS]:7 TC[Scopus]:8 | Submit date:2022/05/23
Commensal microbiome  Pathogentic microorganisms  Sperm whale  
Chromosome-level reference genome of the Siamese fighting fish Betta splendens, a model species for the study of aggression Journal article
GIGASCIENCE, 2018,Volume: 7,Issue: 11
Authors:  Guangyi Fan;  Judy Chan;  Kailong Ma;  Binrui Yang;  He Zhang;  Xianwei Yang;  Chengcheng Shi;  Henry Chun-Hin Law;  Zhitao Ren;  Qiwu Xu;  Qun Liu;  Jiahao Wang;  Wenbin Chen;  Libin Shao;  David Goncalves;  Andreia Ramos;  Sara D. Cardoso;  Min Guo;  Jing Cai;  Xun Xu;  Jian Wang;  Huanming Yang;  Xin Liu;  Yitao Wang
Favorite |  | TC[WOS]:12 TC[Scopus]:13 | Submit date:2020/07/14
Betta Splendens  Aggression  Hi-c  Chromosomal Genome Assembly  Resequencing  Fish Genome